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Bertolusso R., Tian B., Zhao Y., Vergara L., Sabree A., Iwanaszko M., Lipniacki T., Brasier A.R., Kimmel M., Dynamic cross talk model of the epithelial innate immune response to double-stranded RNA stimulation: Coordinated dynamics emerging from cell-level noise, PLOS ONE, 9, 4, e93396-1-21, 2014 |  |
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Kujawska T., Secomski W., Kruglenko E., Krawczyk K., Nowicki A., Determination of Tissue Thermal Conductivity by Measuring and Modeling Temperature Rise Induced in Tissue by Pulsed Focused Ultrasound, PLOS ONE, 9, 4, e94929-1-8, 2014 |  |
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Wierzbicki R., Kobler C., Jensen M.R.B., Łopacińska J., Schmidt M.S., Skolimowski M., Abeille F., Qvortrup K., Molhave K., Mapping the Complex Morphology of Cell Interactions with Nanowire Substrates Using FIB-SEM, PLOS ONE, 8, 1, e53307-1-12, 2013 |  |
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Pękalski J., Żuk P.J., Kochańczyk M., Junkin M., Kellogg R., Tay S., Lipniacki T., Spontaneous NF-κB Activation by Autocrine TNFα Signaling: A Computational Analysis, PLOS ONE, 8, 11, e78887-1-14, 2013 |  |
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Nałęcz-Jawecki Paweł, Gagliardi Paolo Armando, Kochańczyk Marek, Dessauges Coralie, Pertz Olivier, Lipniacki Tomasz, The MAPK/ERK channel capacity exceeds 6 bit/hour, PLOS COMPUTATIONAL BIOLOGY, 19, 5, e1011155-1-21, 2023 |  |
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Mines R.C., Lipniacki T., Shen X., Slow nucleosome dynamics set the transcriptional speed limit and induce RNA polymerase II traffic jams and bursts, PLOS COMPUTATIONAL BIOLOGY, 18, 2, e1009811-1-35, 2022 |  |
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Jetka T., Nienałtowski K., Winarski T., Błoński S., Komorowski M., Information-theoretic analysis of multivariate single-cell signaling responses, PLOS COMPUTATIONAL BIOLOGY, 15, 7, e1007132-1-23, 2019 |  |
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Kardyńska Małgorzata, Paszek Anna, Śmieja Jarosław, Spiller David, Widłak Wiesława, White Michael R. H., Paszek Paweł, Kimmel Marek, Quantitative analysis reveals crosstalk mechanisms of heat shock-induced attenuation of NF-κB signaling at the single cell level, PLOS COMPUTATIONAL BIOLOGY, 14, 4, e1006130-1-25, 2018 |  |
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Habibi I., Cheong R., Lipniacki T., Levchenko A., Emamian E.S., Abdi A., Computation and measurement of cell decision making errors using single cell data, PLOS COMPUTATIONAL BIOLOGY, 13, 4, e1005436-1-17, 2017 |  |
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Hat B., Kochańczyk M., Bogdał M.N., Lipniacki T., Feedbacks, bifurcations, and cell fate decision-making in the p53 system, PLOS COMPUTATIONAL BIOLOGY, 12, 2, e1004787-1-28, 2016 |  |
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Liepe J., Filippi S., Komorowski M., Stumpf M.P.H., Maximising the information content of experiments in systems biology, PLOS COMPUTATIONAL BIOLOGY, 9, 1, e1002888-1-13, 2013 |  |
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Hat B., Kaźmierczak B., Lipniacki T., B cell activation triggered by the formation of the small receptor cluster: a computational study, PLOS COMPUTATIONAL BIOLOGY, 7, 10, 1-13, 2011 |  |
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Bryliński M., Prymula K., Jurkowski W., Kochańczyk M., Stawowczyk E., Konieczny L., Roterman I., Prediction of Functional Sites Based on the Fuzzy Oil Drop Model, PLOS COMPUTATIONAL BIOLOGY, 3, 5, e94-0909-0923, 2007 |  |
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Green Rowan, Wang Hejie, Botchey Carol, Zhang Siu Nam Nancy, Wadsworth Charles, Tyrrell Francesca, Letton James, McBain Andrew J., Paszek Paweł, Krašovec Rok, Knight Christopher G., Collective peroxide detoxification determines microbial mutation rate plasticity in E. coli, PLOS BIOLOGY, 22, 7, e3002711-1-36, 2024 |  |
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Mościcki T., Psiuk R., Słomińska H., Influence of titanium addition on the phase composition and properties of tungsten borides thin films, PLATHINIUM, PLASMA THIN FILM INTERNATIONAL UNION MEETING, 2019-09-23/09-27, ANTIBES (FR), 1-2, 2019 |  |