
Partner: Leszek Kaczmarek |
Promotor prac doktorskich
1. | 2016-06-24 | Koza Paulina (IBD PAN) | The effects of TDP-43 depletion on neuronal plasticity in Syn-TDP-43WT transgenic rat model |
Ostatnie publikacje
1. | Zargarian S., Rinoldi C., Ziai Y., Zakrzewska A., Fiorelli R.♦, Gazińska M.♦, Marinelli M.♦, Majkowska M.♦, Hottowy P.♦, Mindur B.♦, Czajkowski R.♦, Kublik E.♦, Nakielski P., Lanzi M.♦, Kaczmarek L.♦, Pierini F., Chronic Probing of Deep Brain Neuronal Activity Using Nanofibrous Smart Conducting Hydrogel-Based Brain–Machine Interface Probes, Small Science, ISSN: 2688-4046, DOI: 10.1002/smsc.202400463, pp.2400463-1-19, 2025![]() Streszczenie: The mechanical mismatch between microelectrode of brain–machine interfaces (BMIs) and soft brain tissue during electrophysiological investigations leads to inflammation, glial scarring, and compromising performance. Herein, a nanostructured, stimuli-responsive, conductive, and semi-interpenetrating polymer network hydrogel-based coated BMIs probe is introduced. The system interface is composed of a cross-linkable poly(N-isopropylacrylamide)-based copolymer and regioregular poly[3-(6-methoxyhexyl)thiophene] fabricated via electrospinning and integrated into a neural probe. The coating's nanofibrous architecture offers a rapid swelling response and faster shape recovery compared to bulk hydrogels. Moreover, the smart coating becomes more conductive at physiological temperatures, which improves signal transmission efficiency and enhances its stability during chronic use. Indeed, detecting acute neuronal deep brain signals in a mouse model demonstrates that the developed probe can record high-quality signals and action potentials, favorably modulating impedance and capacitance. Evaluation of in vivo neuronal activity and biocompatibility in chronic configuration shows the successful recording of deep brain signals and a lack of substantial inflammatory response in the long-term. The development of conducting fibrous hydrogel bio-interface demonstrates its potential to overcome the limitations of current neural probes, highlighting its promising properties as a candidate for long-term, high-quality detection of neuronal activities for deep brain applications such as BMIs. Afiliacje autorów:
| ![]() | 20p. | ||||||||||||||||||||||||||||||||||||||||||||||||
2. | Rinoldi C., Ziai Y., Zargarian S.S., Nakielski P., Zembrzycki K., Haghighat Bayan M.A., Zakrzewska A., Fiorelli R., Lanzi M.♦, Kostrzewska-Księżyk A.♦, Czajkowski R.♦, Kublik E.♦, Kaczmarek L.♦, Pierini F., In Vivo Chronic Brain Cortex Signal Recording Based on a Soft Conductive Hydrogel Biointerface, ACS Applied Materials and Interfaces, ISSN: 1944-8244, DOI: 10.1021/acsami.2c17025, Vol.15, No.5, pp.6283-6296, 2023![]() Streszczenie: In neuroscience, the acquisition of neural signals from the brain cortex is crucial to analyze brain processes, detect neurological disorders, and offer therapeutic brain–computer interfaces. The design of neural interfaces conformable to the brain tissue is one of today’s major challenges since the insufficient biocompatibility of those systems provokes a fibrotic encapsulation response, leading to an inaccurate signal recording and tissue damage precluding long-term/permanent implants. The design and production of a novel soft neural biointerface made of polyacrylamide hydrogels loaded with plasmonic silver nanocubes are reported herein. Hydrogels are surrounded by a silicon-based template as a supporting element for guaranteeing an intimate neural-hydrogel contact while making possible stable recordings from specific sites in the brain cortex. The nanostructured hydrogels show superior electroconductivity while mimicking the mechanical characteristics of the brain tissue. Furthermore, in vitro biological tests performed by culturing neural progenitor cells demonstrate the biocompatibility of hydrogels along with neuronal differentiation. In vivo chronic neuroinflammation tests on a mouse model show no adverse immune response toward the nanostructured hydrogel-based neural interface. Additionally, electrocorticography acquisitions indicate that the proposed platform permits long-term efficient recordings of neural signals, revealing the suitability of the system as a chronic neural biointerface. Słowa kluczowe: brain−machine interface,conductive hydrogels,nanostructured biomaterials,in vitro and in vivo biocompatibility,long-term neural recording Afiliacje autorów:
| ![]() | 200p. | ||||||||||||||||||||||||||||||||||||||||||||||||
3. | Koza P.♦, Beroun A.♦, Konopka A.♦, Górkiewicz T.♦, Bijoch Ł.♦, Torres J.C.♦, Bulska E.♦, Knapska E.♦, Kaczmarek L.♦, Konopka W.♦, Neuronal TDP-43 depletion affects activity-dependent plasticity, Neurobiology of Disease, ISSN: 0969-9961, DOI: 10.1016/j.nbd.2019.104499, Vol.130, pp.104499-1-12, 2019![]() Streszczenie: TAR DNA-binding protein 43 (TDP-43) is a hallmark of some neurodegenerative disorders, such as frontotemporal lobar degeneration and amyotrophic lateral sclerosis. TDP-43-related pathology is characterized by its abnormally phosphorylated and ubiquitinated aggregates. It is involved in many aspects of RNA processing, including mRNA splicing, transport, and translation. However, its exact physiological function and role in mechanisms that lead to neuronal degeneration remain elusive. Transgenic rats that were characterized by TDP-43 depletion in neurons exhibited enhancement of the acquisition of fear memory. At the cellular level, TDP-43-depleted neurons exhibited a decrease in the short-term plasticity of intrinsic neuronal excitability. The induction of long-term potentiation in the CA3-CA1 areas of the hippocampus resulted in more stable synaptic enhancement. At the molecular level, the protein levels of an unedited (R) FLOP variant of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (AMPAR) GluR1 and GluR2/3 subunits decreased in the hippocampus. Alterations of FLOP/FLIP subunit composition affected AMPAR kinetics, reflected by cyclothiazide-dependent slowing of the decay time of AMPAR-mediated miniature excitatory postsynaptic currents. These findings suggest that TDP-43 may regulate activity-dependent neuronal plasticity, possibly by regulating the splicing of genes that are responsible for fast synaptic transmission and membrane potential. Słowa kluczowe: TDP-43, AMPA receptors, FLOP/FLIP splice variants, PTZ model Afiliacje autorów:
| ![]() | 100p. | ||||||||||||||||||||||||||||||||||||||||||||||||
4. | Stefaniuk M.♦, Gualda E.J.♦, Pawlowska M.♦, Legutko D.♦, Matryba P.♦, Koza P.♦, Konopka W.♦, Owczarek D.♦, Wawrzyniak M.♦, Loza-Alvarez P.♦, Kaczmarek L.♦, Light-sheet microscopy imaging of a whole cleared rat brain with Thy1-GFP transgene, Scientific Reports, ISSN: 2045-2322, DOI: 10.1038/srep28209, Vol.6, pp.28209-1-9, 2016![]() Streszczenie: Whole-brain imaging with light-sheet fluorescence microscopy and optically cleared tissue is a new, rapidly developing research field. Whereas successful attempts to clear and image mouse brain have been reported, a similar result for rats has proven difficult to achieve. Herein, we report on creating novel transgenic rat harboring fluorescent reporter GFP under control of neuronal gene promoter. We then present data on clearing the rat brain, showing that FluoClearBABB was found superior over passive CLARITY and CUBIC methods. Finally, we demonstrate efficient imaging of the rat brain using light-sheet fluorescence microscopy. Afiliacje autorów:
| ![]() | 40p. |